Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClpbQ60649 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ClpbQ60649 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.65■□□□□ 0.74
ClpbQ60649 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.65■□□□□ 0.74
ClpbQ60649 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ClpbQ60649 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClpbQ60649 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClpbQ60649 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.65■□□□□ 0.74
ClpbQ60649 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClpbQ60649 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ClpbQ60649 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ClpbQ60649 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.64■□□□□ 0.73
ClpbQ60649 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.64■□□□□ 0.73
ClpbQ60649 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ClpbQ60649 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ClpbQ60649 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClpbQ60649 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ClpbQ60649 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ClpbQ60649 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClpbQ60649 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ClpbQ60649 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.62■□□□□ 0.73
ClpbQ60649 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClpbQ60649 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClpbQ60649 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClpbQ60649 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ClpbQ60649 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
ClpbQ60649 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClpbQ60649 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.61■□□□□ 0.73
ClpbQ60649 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ClpbQ60649 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ClpbQ60649 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.61■□□□□ 0.73
ClpbQ60649 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.61■□□□□ 0.73
ClpbQ60649 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClpbQ60649 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClpbQ60649 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClpbQ60649 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClpbQ60649 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClpbQ60649 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClpbQ60649 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ClpbQ60649 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClpbQ60649 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.6■□□□□ 0.73
ClpbQ60649 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
ClpbQ60649 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClpbQ60649 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
ClpbQ60649 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.59■□□□□ 0.73
ClpbQ60649 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ClpbQ60649 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClpbQ60649 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ClpbQ60649 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ClpbQ60649 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.58■□□□□ 0.72
ClpbQ60649 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ClpbQ60649 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.58■□□□□ 0.72
ClpbQ60649 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.58■□□□□ 0.72
ClpbQ60649 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ClpbQ60649 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.57■□□□□ 0.72
ClpbQ60649 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ClpbQ60649 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.57■□□□□ 0.72
ClpbQ60649 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ClpbQ60649 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ClpbQ60649 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClpbQ60649 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ClpbQ60649 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.56■□□□□ 0.72
ClpbQ60649 Gm22238-201ENSMUST00000175222 88 ntBASIC19.56■□□□□ 0.72
ClpbQ60649 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ClpbQ60649 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ClpbQ60649 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ClpbQ60649 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ClpbQ60649 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClpbQ60649 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClpbQ60649 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ClpbQ60649 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms