Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr3Q5U430 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr3Q5U430 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr3Q5U430 AV356131-201ENSMUST00000206201 750 ntBASIC25.66■■□□□ 1.7
Ubr3Q5U430 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr3Q5U430 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr3Q5U430 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Ubr3Q5U430 Gm10209-201ENSMUST00000203397 1607 ntBASIC25.66■■□□□ 1.7
Ubr3Q5U430 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.66■■□□□ 1.7
Ubr3Q5U430 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC25.66■■□□□ 1.7
Ubr3Q5U430 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC25.66■■□□□ 1.7
Ubr3Q5U430 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr3Q5U430 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ubr3Q5U430 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC25.65■■□□□ 1.7
Ubr3Q5U430 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC25.65■■□□□ 1.7
Ubr3Q5U430 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ubr3Q5U430 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ubr3Q5U430 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ubr3Q5U430 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC25.64■■□□□ 1.7
Ubr3Q5U430 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ubr3Q5U430 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr3Q5U430 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr3Q5U430 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr3Q5U430 Gm18671-201ENSMUST00000214826 683 ntBASIC25.64■■□□□ 1.69
Ubr3Q5U430 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr3Q5U430 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ubr3Q5U430 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ubr3Q5U430 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ubr3Q5U430 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ubr3Q5U430 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Ubr3Q5U430 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ubr3Q5U430 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC25.62■■□□□ 1.69
Ubr3Q5U430 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ubr3Q5U430 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Ubr3Q5U430 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Ubr3Q5U430 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ubr3Q5U430 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.6■■□□□ 1.69
Ubr3Q5U430 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.6■■□□□ 1.69
Ubr3Q5U430 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC25.6■■□□□ 1.69
Ubr3Q5U430 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ubr3Q5U430 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ubr3Q5U430 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC25.6■■□□□ 1.69
Ubr3Q5U430 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ubr3Q5U430 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Ubr3Q5U430 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ubr3Q5U430 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Ubr3Q5U430 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr3Q5U430 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr3Q5U430 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr3Q5U430 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr3Q5U430 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr3Q5U430 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr3Q5U430 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr3Q5U430 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Ubr3Q5U430 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubr3Q5U430 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ubr3Q5U430 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Ubr3Q5U430 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ubr3Q5U430 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Ubr3Q5U430 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ubr3Q5U430 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ubr3Q5U430 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr3Q5U430 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Ubr3Q5U430 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Ubr3Q5U430 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC25.54■■□□□ 1.68
Ubr3Q5U430 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ubr3Q5U430 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr3Q5U430 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.53■■□□□ 1.68
Ubr3Q5U430 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubr3Q5U430 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
Ubr3Q5U430 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
Ubr3Q5U430 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.51■■□□□ 1.67
Ubr3Q5U430 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr3Q5U430 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr3Q5U430 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.51■■□□□ 1.67
Ubr3Q5U430 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr3Q5U430 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr3Q5U430 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Ubr3Q5U430 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC25.51■■□□□ 1.67
Ubr3Q5U430 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms