Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-4Q5R1H9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-4Q5R1H9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav7d-4Q5R1H9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Mir3960-201ENSMUST00000198213 73 ntBASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-4Q5R1H9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-4Q5R1H9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-4Q5R1H9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav7d-4Q5R1H9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7d-4Q5R1H9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7d-4Q5R1H9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7d-4Q5R1H9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7d-4Q5R1H9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7d-4Q5R1H9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-4Q5R1H9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms