Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Rnf43Q5NCP0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf43Q5NCP0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf43Q5NCP0 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.03■□□□□ 0.96
Rnf43Q5NCP0 Gm5874-201ENSMUST00000096101 508 ntBASIC21.03■□□□□ 0.96
Rnf43Q5NCP0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf43Q5NCP0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf43Q5NCP0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rnf43Q5NCP0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rnf43Q5NCP0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf43Q5NCP0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf43Q5NCP0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rnf43Q5NCP0 Gm12251-201ENSMUST00000117893 792 ntBASIC21■□□□□ 0.95
Rnf43Q5NCP0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf43Q5NCP0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf43Q5NCP0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf43Q5NCP0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf43Q5NCP0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf43Q5NCP0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.98■□□□□ 0.95
Rnf43Q5NCP0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf43Q5NCP0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf43Q5NCP0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf43Q5NCP0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rnf43Q5NCP0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf43Q5NCP0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf43Q5NCP0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf43Q5NCP0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf43Q5NCP0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf43Q5NCP0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rnf43Q5NCP0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf43Q5NCP0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf43Q5NCP0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf43Q5NCP0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf43Q5NCP0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Gm29257-201ENSMUST00000186115 639 ntBASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf43Q5NCP0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms