Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps13aQ5H8C4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps13aQ5H8C4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.88■□□□□ 0.93
Vps13aQ5H8C4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps13aQ5H8C4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps13aQ5H8C4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps13aQ5H8C4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.87■□□□□ 0.93
Vps13aQ5H8C4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps13aQ5H8C4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vps13aQ5H8C4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps13aQ5H8C4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps13aQ5H8C4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.87■□□□□ 0.93
Vps13aQ5H8C4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps13aQ5H8C4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps13aQ5H8C4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps13aQ5H8C4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps13aQ5H8C4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps13aQ5H8C4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.85■□□□□ 0.93
Vps13aQ5H8C4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps13aQ5H8C4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps13aQ5H8C4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps13aQ5H8C4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps13aQ5H8C4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps13aQ5H8C4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.83■□□□□ 0.93
Vps13aQ5H8C4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps13aQ5H8C4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps13aQ5H8C4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps13aQ5H8C4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Vps13aQ5H8C4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vps13aQ5H8C4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.83■□□□□ 0.92
Vps13aQ5H8C4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps13aQ5H8C4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Gm12527-201ENSMUST00000117967 564 ntBASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.81■□□□□ 0.92
Vps13aQ5H8C4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.8■□□□□ 0.92
Vps13aQ5H8C4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps13aQ5H8C4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps13aQ5H8C4 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.8■□□□□ 0.92
Vps13aQ5H8C4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps13aQ5H8C4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Gm7977-201ENSMUST00000193787 748 ntBASIC20.79■□□□□ 0.92
Vps13aQ5H8C4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps13aQ5H8C4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Vps13aQ5H8C4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps13aQ5H8C4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vps13aQ5H8C4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps13aQ5H8C4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Vps13aQ5H8C4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.77■□□□□ 0.91
Vps13aQ5H8C4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps13aQ5H8C4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps13aQ5H8C4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vps13aQ5H8C4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps13aQ5H8C4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps13aQ5H8C4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps13aQ5H8C4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Vps13aQ5H8C4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.74■□□□□ 0.91
Vps13aQ5H8C4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.74■□□□□ 0.91
Vps13aQ5H8C4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps13aQ5H8C4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.74■□□□□ 0.91
Vps13aQ5H8C4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps13aQ5H8C4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.73■□□□□ 0.91
Vps13aQ5H8C4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps13aQ5H8C4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps13aQ5H8C4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms