Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.36■■□□□ 1.01
Bdp1Q571C7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Bdp1Q571C7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Bdp1Q571C7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Bdp1Q571C7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.35■■□□□ 1.01
Bdp1Q571C7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.34■■□□□ 1.01
Bdp1Q571C7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Bdp1Q571C7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Bdp1Q571C7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.33■■□□□ 1
Bdp1Q571C7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.33■■□□□ 1
Bdp1Q571C7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.33■■□□□ 1
Bdp1Q571C7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.32■■□□□ 1
Bdp1Q571C7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.32■■□□□ 1
Bdp1Q571C7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Bdp1Q571C7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Bdp1Q571C7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Bdp1Q571C7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Bdp1Q571C7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Bdp1Q571C7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Bdp1Q571C7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Bdp1Q571C7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.31■■□□□ 1
Bdp1Q571C7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bdp1Q571C7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bdp1Q571C7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.3■■□□□ 1
Bdp1Q571C7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.3■■□□□ 1
Bdp1Q571C7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bdp1Q571C7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bdp1Q571C7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.29■■□□□ 1
Bdp1Q571C7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.29■■□□□ 1
Bdp1Q571C7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.29■■□□□ 1
Bdp1Q571C7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Bdp1Q571C7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bdp1Q571C7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bdp1Q571C7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Bdp1Q571C7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Bdp1Q571C7 Gm13148-201ENSMUST00000118892 745 ntBASIC21.28■■□□□ 1
Bdp1Q571C7 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.28■■□□□ 1
Bdp1Q571C7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.28■■□□□ 1
Bdp1Q571C7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bdp1Q571C7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bdp1Q571C7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.28■■□□□ 1
Bdp1Q571C7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Bdp1Q571C7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.28■■□□□ 1
Bdp1Q571C7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.28■■□□□ 1
Bdp1Q571C7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Bdp1Q571C7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.27■■□□□ 1
Bdp1Q571C7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Bdp1Q571C7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.27■■□□□ 1
Bdp1Q571C7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.27■■□□□ 1
Bdp1Q571C7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Bdp1Q571C7 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.27■□□□□ 0.99
Bdp1Q571C7 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.26■□□□□ 0.99
Bdp1Q571C7 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.26■□□□□ 0.99
Bdp1Q571C7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Gm43530-201ENSMUST00000195920 274 ntBASIC21.26■□□□□ 0.99
Bdp1Q571C7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bdp1Q571C7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.25■□□□□ 0.99
Bdp1Q571C7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Bdp1Q571C7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Bdp1Q571C7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.24■□□□□ 0.99
Bdp1Q571C7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bdp1Q571C7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bdp1Q571C7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.24■□□□□ 0.99
Bdp1Q571C7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bdp1Q571C7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bdp1Q571C7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bdp1Q571C7 Mir5133-201ENSMUST00000174955 77 ntBASIC21.23■□□□□ 0.99
Bdp1Q571C7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Bdp1Q571C7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.23■□□□□ 0.99
Bdp1Q571C7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.22■□□□□ 0.99
Bdp1Q571C7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.22■□□□□ 0.99
Bdp1Q571C7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bdp1Q571C7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bdp1Q571C7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bdp1Q571C7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms