Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Scn2bQ56A07 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Gm43566-201ENSMUST00000196851 808 ntBASIC20.3■□□□□ 0.84
Scn2bQ56A07 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn2bQ56A07 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn2bQ56A07 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn2bQ56A07 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn2bQ56A07 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn2bQ56A07 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn2bQ56A07 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.27■□□□□ 0.84
Scn2bQ56A07 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn2bQ56A07 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn2bQ56A07 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 Gm13238-201ENSMUST00000117655 780 ntBASIC20.26■□□□□ 0.83
Scn2bQ56A07 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn2bQ56A07 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.25■□□□□ 0.83
Scn2bQ56A07 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.25■□□□□ 0.83
Scn2bQ56A07 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn2bQ56A07 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.25■□□□□ 0.83
Scn2bQ56A07 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Scn2bQ56A07 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn2bQ56A07 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.23■□□□□ 0.83
Scn2bQ56A07 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Scn2bQ56A07 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn2bQ56A07 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn2bQ56A07 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms