Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.45■□□□□ 0.7
Spg11Q3UHA3 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.45■□□□□ 0.7
Spg11Q3UHA3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg11Q3UHA3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Spg11Q3UHA3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg11Q3UHA3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg11Q3UHA3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.44■□□□□ 0.7
Spg11Q3UHA3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spg11Q3UHA3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spg11Q3UHA3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Spg11Q3UHA3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.44■□□□□ 0.7
Spg11Q3UHA3 Gm13168-201ENSMUST00000121771 632 ntBASIC19.43■□□□□ 0.7
Spg11Q3UHA3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Spg11Q3UHA3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg11Q3UHA3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg11Q3UHA3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Spg11Q3UHA3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.43■□□□□ 0.7
Spg11Q3UHA3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.43■□□□□ 0.7
Spg11Q3UHA3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg11Q3UHA3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg11Q3UHA3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Spg11Q3UHA3 Mir5133-201ENSMUST00000174955 77 ntBASIC19.42■□□□□ 0.7
Spg11Q3UHA3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Spg11Q3UHA3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.41■□□□□ 0.7
Spg11Q3UHA3 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.41■□□□□ 0.7
Spg11Q3UHA3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spg11Q3UHA3 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.4■□□□□ 0.7
Spg11Q3UHA3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spg11Q3UHA3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.4■□□□□ 0.7
Spg11Q3UHA3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spg11Q3UHA3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spg11Q3UHA3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Gm10812-201ENSMUST00000099864 546 ntBASIC19.39■□□□□ 0.69
Spg11Q3UHA3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Spg11Q3UHA3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Spg11Q3UHA3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Spg11Q3UHA3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.38■□□□□ 0.69
Spg11Q3UHA3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.37■□□□□ 0.69
Spg11Q3UHA3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spg11Q3UHA3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Gm37856-201ENSMUST00000191634 999 ntBASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spg11Q3UHA3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spg11Q3UHA3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.35■□□□□ 0.69
Spg11Q3UHA3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Spg11Q3UHA3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.34■□□□□ 0.69
Spg11Q3UHA3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spg11Q3UHA3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.34■□□□□ 0.69
Spg11Q3UHA3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Spg11Q3UHA3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Spg11Q3UHA3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spg11Q3UHA3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.33■□□□□ 0.69
Spg11Q3UHA3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.33■□□□□ 0.68
Spg11Q3UHA3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Spg11Q3UHA3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.33■□□□□ 0.68
Spg11Q3UHA3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Spg11Q3UHA3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Spg11Q3UHA3 Reep4-203ENSMUST00000226563 1444 ntBASIC19.33■□□□□ 0.68
Spg11Q3UHA3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.32■□□□□ 0.68
Spg11Q3UHA3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms