Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.68■□□□□ 0.9
Shcbp1lQ3TTP0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shcbp1lQ3TTP0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Shcbp1lQ3TTP0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shcbp1lQ3TTP0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shcbp1lQ3TTP0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shcbp1lQ3TTP0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.67■□□□□ 0.9
Shcbp1lQ3TTP0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Shcbp1lQ3TTP0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.67■□□□□ 0.9
Shcbp1lQ3TTP0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shcbp1lQ3TTP0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shcbp1lQ3TTP0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Gm12821-201ENSMUST00000120022 600 ntBASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shcbp1lQ3TTP0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Shcbp1lQ3TTP0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shcbp1lQ3TTP0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shcbp1lQ3TTP0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shcbp1lQ3TTP0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.64■□□□□ 0.89
Shcbp1lQ3TTP0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.64■□□□□ 0.89
Shcbp1lQ3TTP0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shcbp1lQ3TTP0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.64■□□□□ 0.89
Shcbp1lQ3TTP0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shcbp1lQ3TTP0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Shcbp1lQ3TTP0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.61■□□□□ 0.89
Shcbp1lQ3TTP0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shcbp1lQ3TTP0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Shcbp1lQ3TTP0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shcbp1lQ3TTP0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms