Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc4Q3TCX3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc4Q3TCX3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc4Q3TCX3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc4Q3TCX3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Khdc4Q3TCX3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.48■□□□□ 0.71
Khdc4Q3TCX3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Gm12821-201ENSMUST00000120022 600 ntBASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc4Q3TCX3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Khdc4Q3TCX3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Khdc4Q3TCX3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Khdc4Q3TCX3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Khdc4Q3TCX3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Khdc4Q3TCX3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Khdc4Q3TCX3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Golgb1-201ENSMUST00000023534 498 ntBASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc4Q3TCX3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc4Q3TCX3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc4Q3TCX3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc4Q3TCX3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc4Q3TCX3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Khdc4Q3TCX3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Gm27454-201ENSMUST00000185090 204 ntBASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Khdc4Q3TCX3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Khdc4Q3TCX3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc4Q3TCX3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Gm45417-201ENSMUST00000209533 758 ntBASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc4Q3TCX3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.39■□□□□ 0.69
Khdc4Q3TCX3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Khdc4Q3TCX3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.39■□□□□ 0.69
Khdc4Q3TCX3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Khdc4Q3TCX3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Khdc4Q3TCX3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc4Q3TCX3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Khdc4Q3TCX3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.38■□□□□ 0.69
Khdc4Q3TCX3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc4Q3TCX3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms