Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1l3Q2EG98 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1l3Q2EG98 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pkd1l3Q2EG98 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Gm12251-201ENSMUST00000117893 792 ntBASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pkd1l3Q2EG98 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pkd1l3Q2EG98 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Mir7075-201ENSMUST00000184187 82 ntBASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1l3Q2EG98 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.4■□□□□ 0.54
Pkd1l3Q2EG98 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pkd1l3Q2EG98 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pkd1l3Q2EG98 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pkd1l3Q2EG98 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pkd1l3Q2EG98 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Gm43530-201ENSMUST00000195920 274 ntBASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1l3Q2EG98 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pkd1l3Q2EG98 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pkd1l3Q2EG98 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pkd1l3Q2EG98 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pkd1l3Q2EG98 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.36■□□□□ 0.53
Pkd1l3Q2EG98 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.36■□□□□ 0.53
Pkd1l3Q2EG98 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms