Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Chd8Q09XV5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd8Q09XV5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd8Q09XV5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd8Q09XV5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd8Q09XV5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.94■□□□□ 0.62
Chd8Q09XV5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd8Q09XV5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd8Q09XV5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd8Q09XV5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd8Q09XV5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd8Q09XV5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.93■□□□□ 0.62
Chd8Q09XV5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd8Q09XV5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Gm15565-201ENSMUST00000118890 427 ntBASIC18.92■□□□□ 0.62
Chd8Q09XV5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd8Q09XV5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd8Q09XV5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chd8Q09XV5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chd8Q09XV5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd8Q09XV5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd8Q09XV5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd8Q09XV5 Zxda-201ENSMUST00000117281 2621 ntBASIC18.91■□□□□ 0.62
Chd8Q09XV5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.9■□□□□ 0.62
Chd8Q09XV5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd8Q09XV5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd8Q09XV5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.9■□□□□ 0.62
Chd8Q09XV5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd8Q09XV5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
Chd8Q09XV5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.89■□□□□ 0.62
Chd8Q09XV5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Chd8Q09XV5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Chd8Q09XV5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd8Q09XV5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd8Q09XV5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.88■□□□□ 0.61
Chd8Q09XV5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.88■□□□□ 0.61
Chd8Q09XV5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd8Q09XV5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd8Q09XV5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chd8Q09XV5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd8Q09XV5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd8Q09XV5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd8Q09XV5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd8Q09XV5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chd8Q09XV5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chd8Q09XV5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms