Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.43■□□□□ 0.86
Shox2P70390 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.43■□□□□ 0.86
Shox2P70390 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Shox2P70390 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shox2P70390 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shox2P70390 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shox2P70390 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Shox2P70390 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.42■□□□□ 0.86
Shox2P70390 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shox2P70390 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shox2P70390 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shox2P70390 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shox2P70390 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.41■□□□□ 0.86
Shox2P70390 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shox2P70390 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.41■□□□□ 0.86
Shox2P70390 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.41■□□□□ 0.86
Shox2P70390 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shox2P70390 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.41■□□□□ 0.86
Shox2P70390 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shox2P70390 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shox2P70390 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shox2P70390 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shox2P70390 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shox2P70390 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Shox2P70390 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shox2P70390 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shox2P70390 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shox2P70390 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shox2P70390 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shox2P70390 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shox2P70390 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shox2P70390 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Shox2P70390 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shox2P70390 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shox2P70390 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Shox2P70390 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Shox2P70390 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.38■□□□□ 0.85
Shox2P70390 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shox2P70390 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shox2P70390 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shox2P70390 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shox2P70390 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Shox2P70390 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shox2P70390 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shox2P70390 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shox2P70390 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shox2P70390 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shox2P70390 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shox2P70390 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.35■□□□□ 0.85
Shox2P70390 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shox2P70390 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shox2P70390 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shox2P70390 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shox2P70390 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shox2P70390 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Shox2P70390 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Shox2P70390 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.34■□□□□ 0.85
Shox2P70390 Gm44428-201ENSMUST00000204474 874 ntBASIC20.34■□□□□ 0.85
Shox2P70390 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.34■□□□□ 0.85
Shox2P70390 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Shox2P70390 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shox2P70390 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shox2P70390 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shox2P70390 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shox2P70390 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Shox2P70390 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shox2P70390 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Shox2P70390 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.33■□□□□ 0.85
Shox2P70390 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shox2P70390 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shox2P70390 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shox2P70390 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Shox2P70390 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Shox2P70390 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Shox2P70390 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Shox2P70390 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.32■□□□□ 0.84
Shox2P70390 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shox2P70390 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Shox2P70390 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shox2P70390 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shox2P70390 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shox2P70390 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shox2P70390 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shox2P70390 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms