Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx1P63006 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.25■□□□□ 0.83
Lhx1P63006 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx1P63006 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx1P63006 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx1P63006 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx1P63006 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx1P63006 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx1P63006 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx1P63006 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx1P63006 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx1P63006 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.23■□□□□ 0.83
Lhx1P63006 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lhx1P63006 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx1P63006 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx1P63006 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.22■□□□□ 0.83
Lhx1P63006 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx1P63006 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Lhx1P63006 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.22■□□□□ 0.83
Lhx1P63006 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Lhx1P63006 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx1P63006 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx1P63006 Gm12821-201ENSMUST00000120022 600 ntBASIC20.21■□□□□ 0.83
Lhx1P63006 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.21■□□□□ 0.83
Lhx1P63006 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.21■□□□□ 0.83
Lhx1P63006 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx1P63006 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx1P63006 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx1P63006 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Lhx1P63006 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lhx1P63006 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx1P63006 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.2■□□□□ 0.82
Lhx1P63006 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.19■□□□□ 0.82
Lhx1P63006 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.19■□□□□ 0.82
Lhx1P63006 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.19■□□□□ 0.82
Lhx1P63006 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx1P63006 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lhx1P63006 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx1P63006 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx1P63006 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Lhx1P63006 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx1P63006 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx1P63006 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Lhx1P63006 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lhx1P63006 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx1P63006 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lhx1P63006 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Gm43530-201ENSMUST00000195920 274 ntBASIC20.16■□□□□ 0.82
Lhx1P63006 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.16■□□□□ 0.82
Lhx1P63006 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.16■□□□□ 0.82
Lhx1P63006 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.16■□□□□ 0.82
Lhx1P63006 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx1P63006 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx1P63006 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Lhx1P63006 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx1P63006 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx1P63006 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lhx1P63006 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx1P63006 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx1P63006 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lhx1P63006 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lhx1P63006 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.14■□□□□ 0.81
Lhx1P63006 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.14■□□□□ 0.81
Lhx1P63006 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.14■□□□□ 0.81
Lhx1P63006 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx1P63006 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms