Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Uba52P62984 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.67■□□□□ 0.42
Uba52P62984 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Uba52P62984 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba52P62984 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Uba52P62984 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba52P62984 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba52P62984 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uba52P62984 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uba52P62984 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Uba52P62984 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Uba52P62984 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Uba52P62984 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Uba52P62984 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uba52P62984 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Uba52P62984 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.65■□□□□ 0.42
Uba52P62984 Golph3-202ENSMUST00000226517 2359 ntBASIC17.65■□□□□ 0.42
Uba52P62984 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.65■□□□□ 0.42
Uba52P62984 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uba52P62984 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Uba52P62984 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uba52P62984 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Uba52P62984 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Uba52P62984 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Uba52P62984 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Uba52P62984 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.63■□□□□ 0.41
Uba52P62984 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Uba52P62984 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Uba52P62984 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba52P62984 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.63■□□□□ 0.41
Uba52P62984 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba52P62984 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba52P62984 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.62■□□□□ 0.41
Uba52P62984 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Uba52P62984 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba52P62984 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Uba52P62984 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba52P62984 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba52P62984 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba52P62984 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba52P62984 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba52P62984 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba52P62984 Gm9959-201ENSMUST00000068277 390 ntBASIC17.61■□□□□ 0.41
Uba52P62984 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba52P62984 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Uba52P62984 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Uba52P62984 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Uba52P62984 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba52P62984 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.6■□□□□ 0.41
Uba52P62984 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.6■□□□□ 0.41
Uba52P62984 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.6■□□□□ 0.41
Uba52P62984 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba52P62984 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.6■□□□□ 0.41
Uba52P62984 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.6■□□□□ 0.41
Uba52P62984 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Uba52P62984 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba52P62984 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uba52P62984 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.59■□□□□ 0.41
Uba52P62984 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uba52P62984 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba52P62984 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Uba52P62984 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba52P62984 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba52P62984 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uba52P62984 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.58■□□□□ 0.41
Uba52P62984 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uba52P62984 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Uba52P62984 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Uba52P62984 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba52P62984 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba52P62984 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.58■□□□□ 0.4
Uba52P62984 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba52P62984 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba52P62984 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba52P62984 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Uba52P62984 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba52P62984 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Uba52P62984 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba52P62984 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba52P62984 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.57■□□□□ 0.4
Uba52P62984 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba52P62984 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba52P62984 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms