Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Msh6P54276 Gm8493-201ENSMUST00000196881 489 ntBASIC26.47■■□□□ 1.83
Msh6P54276 Gm43173-201ENSMUST00000202246 593 ntBASIC26.47■■□□□ 1.83
Msh6P54276 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Msh6P54276 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Msh6P54276 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Msh6P54276 Wdr70-203ENSMUST00000227371 1130 ntBASIC26.46■■□□□ 1.83
Msh6P54276 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Msh6P54276 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Msh6P54276 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Msh6P54276 Gm26766-202ENSMUST00000227544 2347 ntBASIC26.46■■□□□ 1.83
Msh6P54276 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Msh6P54276 Gm29257-201ENSMUST00000186115 639 ntBASIC26.46■■□□□ 1.83
Msh6P54276 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Msh6P54276 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Msh6P54276 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Msh6P54276 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC26.45■■□□□ 1.82
Msh6P54276 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Msh6P54276 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Msh6P54276 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
Msh6P54276 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Msh6P54276 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Msh6P54276 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC26.44■■□□□ 1.82
Msh6P54276 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Msh6P54276 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC26.44■■□□□ 1.82
Msh6P54276 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.44■■□□□ 1.82
Msh6P54276 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Msh6P54276 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Msh6P54276 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC26.43■■□□□ 1.82
Msh6P54276 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Msh6P54276 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Msh6P54276 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Msh6P54276 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Msh6P54276 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Msh6P54276 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Msh6P54276 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Msh6P54276 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Msh6P54276 Gm43403-201ENSMUST00000198011 1786 ntBASIC26.42■■□□□ 1.82
Msh6P54276 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Msh6P54276 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Msh6P54276 Gm5874-201ENSMUST00000096101 508 ntBASIC26.41■■□□□ 1.82
Msh6P54276 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Msh6P54276 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC26.41■■□□□ 1.82
Msh6P54276 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
Msh6P54276 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.41■■□□□ 1.82
Msh6P54276 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Msh6P54276 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Msh6P54276 Gm12251-201ENSMUST00000117893 792 ntBASIC26.4■■□□□ 1.82
Msh6P54276 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.4■■□□□ 1.82
Msh6P54276 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Msh6P54276 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Msh6P54276 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Msh6P54276 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Msh6P54276 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Msh6P54276 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Msh6P54276 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Msh6P54276 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Msh6P54276 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Msh6P54276 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC26.39■■□□□ 1.81
Msh6P54276 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Msh6P54276 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Msh6P54276 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Msh6P54276 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Msh6P54276 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Msh6P54276 Gm5576-201ENSMUST00000075809 1236 ntBASIC26.37■■□□□ 1.81
Msh6P54276 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Msh6P54276 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Msh6P54276 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Msh6P54276 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Msh6P54276 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh6P54276 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh6P54276 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh6P54276 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh6P54276 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC26.35■■□□□ 1.81
Msh6P54276 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.35■■□□□ 1.81
Msh6P54276 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Msh6P54276 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Msh6P54276 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Msh6P54276 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Msh6P54276 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Msh6P54276 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.34■■□□□ 1.81
Msh6P54276 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Msh6P54276 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Msh6P54276 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Msh6P54276 Gm7143-201ENSMUST00000222811 859 ntBASIC26.33■■□□□ 1.81
Msh6P54276 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Msh6P54276 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Msh6P54276 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Msh6P54276 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC26.33■■□□□ 1.8
Msh6P54276 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
Msh6P54276 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Msh6P54276 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Msh6P54276 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Msh6P54276 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Msh6P54276 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.32■■□□□ 1.8
Msh6P54276 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Msh6P54276 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
Msh6P54276 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Msh6P54276 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Msh6P54276 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms