Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx3P50481 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx3P50481 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Lhx3P50481 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx3P50481 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx3P50481 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lhx3P50481 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx3P50481 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Lhx3P50481 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx3P50481 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx3P50481 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx3P50481 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx3P50481 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx3P50481 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.97■□□□□ 0.95
Lhx3P50481 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx3P50481 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.97■□□□□ 0.95
Lhx3P50481 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx3P50481 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx3P50481 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx3P50481 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx3P50481 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.96■□□□□ 0.95
Lhx3P50481 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.96■□□□□ 0.95
Lhx3P50481 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx3P50481 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx3P50481 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx3P50481 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Lhx3P50481 Gm21956-201ENSMUST00000179946 522 ntBASIC20.95■□□□□ 0.94
Lhx3P50481 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.95■□□□□ 0.94
Lhx3P50481 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx3P50481 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx3P50481 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx3P50481 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Lhx3P50481 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx3P50481 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx3P50481 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx3P50481 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx3P50481 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Lhx3P50481 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx3P50481 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx3P50481 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Lhx3P50481 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.93■□□□□ 0.94
Lhx3P50481 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx3P50481 Gm13241-201ENSMUST00000094493 780 ntBASIC20.93■□□□□ 0.94
Lhx3P50481 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx3P50481 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx3P50481 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx3P50481 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx3P50481 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx3P50481 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx3P50481 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lhx3P50481 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx3P50481 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Lhx3P50481 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx3P50481 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx3P50481 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Lhx3P50481 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx3P50481 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx3P50481 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx3P50481 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.9■□□□□ 0.94
Lhx3P50481 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lhx3P50481 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx3P50481 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx3P50481 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx3P50481 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.89■□□□□ 0.94
Lhx3P50481 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lhx3P50481 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Lhx3P50481 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx3P50481 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx3P50481 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.89■□□□□ 0.93
Lhx3P50481 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.89■□□□□ 0.93
Lhx3P50481 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx3P50481 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx3P50481 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Lhx3P50481 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.88■□□□□ 0.93
Lhx3P50481 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx3P50481 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx3P50481 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx3P50481 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.87■□□□□ 0.93
Lhx3P50481 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx3P50481 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx3P50481 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx3P50481 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx3P50481 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.86■□□□□ 0.93
Lhx3P50481 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.86■□□□□ 0.93
Lhx3P50481 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 Gm43530-201ENSMUST00000195920 274 ntBASIC20.86■□□□□ 0.93
Lhx3P50481 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx3P50481 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx3P50481 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms