Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-1P50220 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-1P50220 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-1P50220 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-1P50220 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.97■□□□□ 0.31
Nkx2-1P50220 Gm16437-201ENSMUST00000025669 507 ntBASIC16.97■□□□□ 0.31
Nkx2-1P50220 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nkx2-1P50220 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.97■□□□□ 0.31
Nkx2-1P50220 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-1P50220 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nkx2-1P50220 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-1P50220 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-1P50220 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Nkx2-1P50220 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-1P50220 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.95■□□□□ 0.3
Nkx2-1P50220 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.94■□□□□ 0.3
Nkx2-1P50220 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-1P50220 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Nkx2-1P50220 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-1P50220 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Golph3-202ENSMUST00000226517 2359 ntBASIC16.91■□□□□ 0.3
Nkx2-1P50220 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-1P50220 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-1P50220 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.89■□□□□ 0.3
Nkx2-1P50220 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Nkx2-1P50220 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.89■□□□□ 0.3
Nkx2-1P50220 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-1P50220 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms