Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Xcl1P47993 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Xcl1P47993 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Xcl1P47993 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Xcl1P47993 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Xcl1P47993 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Xcl1P47993 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Xcl1P47993 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Xcl1P47993 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC13.46□□□□□ -0.25
Xcl1P47993 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Xcl1P47993 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Xcl1P47993 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Xcl1P47993 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Xcl1P47993 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Xcl1P47993 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Xcl1P47993 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC13.45□□□□□ -0.26
Xcl1P47993 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.45□□□□□ -0.26
Xcl1P47993 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.45□□□□□ -0.26
Xcl1P47993 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.45□□□□□ -0.26
Xcl1P47993 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.45□□□□□ -0.26
Xcl1P47993 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Xcl1P47993 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Xcl1P47993 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.44□□□□□ -0.26
Xcl1P47993 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC13.44□□□□□ -0.26
Xcl1P47993 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Xcl1P47993 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Gm30023-201ENSMUST00000197970 889 ntBASIC13.44□□□□□ -0.26
Xcl1P47993 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.44□□□□□ -0.26
Xcl1P47993 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Xcl1P47993 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Xcl1P47993 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Xcl1P47993 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Xcl1P47993 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Xcl1P47993 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Xcl1P47993 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.43□□□□□ -0.26
Xcl1P47993 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Xcl1P47993 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.42□□□□□ -0.26
Xcl1P47993 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.42□□□□□ -0.26
Xcl1P47993 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Xcl1P47993 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Xcl1P47993 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.41□□□□□ -0.26
Xcl1P47993 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Xcl1P47993 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Xcl1P47993 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.41□□□□□ -0.26
Xcl1P47993 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms