Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.17■□□□□ 0.34
Foxa3P35584 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa3P35584 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Foxa3P35584 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.16■□□□□ 0.34
Foxa3P35584 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Foxa3P35584 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Foxa3P35584 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.16■□□□□ 0.34
Foxa3P35584 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Foxa3P35584 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa3P35584 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.15■□□□□ 0.34
Foxa3P35584 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Foxa3P35584 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa3P35584 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa3P35584 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.15■□□□□ 0.34
Foxa3P35584 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Foxa3P35584 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa3P35584 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Foxa3P35584 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Foxa3P35584 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Foxa3P35584 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxa3P35584 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Foxa3P35584 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.14■□□□□ 0.33
Foxa3P35584 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.14■□□□□ 0.33
Foxa3P35584 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Foxa3P35584 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxa3P35584 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Foxa3P35584 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Foxa3P35584 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxa3P35584 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxa3P35584 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxa3P35584 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxa3P35584 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.13■□□□□ 0.33
Foxa3P35584 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxa3P35584 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.12■□□□□ 0.33
Foxa3P35584 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Foxa3P35584 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Foxa3P35584 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.12■□□□□ 0.33
Foxa3P35584 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxa3P35584 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.11■□□□□ 0.33
Foxa3P35584 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Foxa3P35584 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxa3P35584 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 Gm44428-201ENSMUST00000204474 874 ntBASIC17.1■□□□□ 0.33
Foxa3P35584 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.1■□□□□ 0.33
Foxa3P35584 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Foxa3P35584 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxa3P35584 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Foxa3P35584 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxa3P35584 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.1■□□□□ 0.33
Foxa3P35584 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxa3P35584 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Gm11599-201ENSMUST00000118720 878 ntBASIC17.09■□□□□ 0.33
Foxa3P35584 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms