Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.33■■□□□ 1.17
Pde6bP23440 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pde6bP23440 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pde6bP23440 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.33■■□□□ 1.16
Pde6bP23440 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Pde6bP23440 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pde6bP23440 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Pde6bP23440 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.32■■□□□ 1.16
Pde6bP23440 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Pde6bP23440 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pde6bP23440 Gm6139-201ENSMUST00000079261 882 ntBASIC22.32■■□□□ 1.16
Pde6bP23440 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pde6bP23440 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.31■■□□□ 1.16
Pde6bP23440 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pde6bP23440 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.31■■□□□ 1.16
Pde6bP23440 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pde6bP23440 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pde6bP23440 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pde6bP23440 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pde6bP23440 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pde6bP23440 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pde6bP23440 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.31■■□□□ 1.16
Pde6bP23440 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pde6bP23440 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pde6bP23440 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pde6bP23440 Gm7143-201ENSMUST00000222811 859 ntBASIC22.3■■□□□ 1.16
Pde6bP23440 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pde6bP23440 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pde6bP23440 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pde6bP23440 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pde6bP23440 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.29■■□□□ 1.16
Pde6bP23440 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pde6bP23440 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pde6bP23440 Mir7075-201ENSMUST00000184187 82 ntBASIC22.28■■□□□ 1.16
Pde6bP23440 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pde6bP23440 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pde6bP23440 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pde6bP23440 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.28■■□□□ 1.16
Pde6bP23440 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pde6bP23440 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pde6bP23440 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pde6bP23440 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pde6bP23440 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pde6bP23440 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pde6bP23440 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Pde6bP23440 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pde6bP23440 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pde6bP23440 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pde6bP23440 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Pde6bP23440 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pde6bP23440 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pde6bP23440 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pde6bP23440 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pde6bP23440 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pde6bP23440 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pde6bP23440 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Pde6bP23440 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pde6bP23440 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Pde6bP23440 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.25■■□□□ 1.15
Pde6bP23440 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pde6bP23440 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pde6bP23440 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Pde6bP23440 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pde6bP23440 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pde6bP23440 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pde6bP23440 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.23■■□□□ 1.15
Pde6bP23440 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.23■■□□□ 1.15
Pde6bP23440 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.23■■□□□ 1.15
Pde6bP23440 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Pde6bP23440 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Pde6bP23440 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.23■■□□□ 1.15
Pde6bP23440 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pde6bP23440 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pde6bP23440 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pde6bP23440 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pde6bP23440 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pde6bP23440 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pde6bP23440 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.22■■□□□ 1.15
Pde6bP23440 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pde6bP23440 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.22■■□□□ 1.15
Pde6bP23440 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.22■■□□□ 1.15
Pde6bP23440 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.22■■□□□ 1.15
Pde6bP23440 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pde6bP23440 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pde6bP23440 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.22■■□□□ 1.15
Pde6bP23440 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms