Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cbx3P23198 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Cbx3P23198 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cbx3P23198 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cbx3P23198 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cbx3P23198 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.5■□□□□ 0.55
Cbx3P23198 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cbx3P23198 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cbx3P23198 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.5■□□□□ 0.55
Cbx3P23198 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cbx3P23198 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cbx3P23198 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cbx3P23198 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.5■□□□□ 0.55
Cbx3P23198 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.49■□□□□ 0.55
Cbx3P23198 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.49■□□□□ 0.55
Cbx3P23198 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cbx3P23198 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.48■□□□□ 0.55
Cbx3P23198 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cbx3P23198 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
Cbx3P23198 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Cbx3P23198 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.48■□□□□ 0.55
Cbx3P23198 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cbx3P23198 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.47■□□□□ 0.55
Cbx3P23198 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.47■□□□□ 0.55
Cbx3P23198 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cbx3P23198 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.47■□□□□ 0.55
Cbx3P23198 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Cbx3P23198 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Cbx3P23198 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cbx3P23198 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.46■□□□□ 0.55
Cbx3P23198 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cbx3P23198 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.46■□□□□ 0.55
Cbx3P23198 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cbx3P23198 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cbx3P23198 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cbx3P23198 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cbx3P23198 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cbx3P23198 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cbx3P23198 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cbx3P23198 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cbx3P23198 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cbx3P23198 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.45■□□□□ 0.54
Cbx3P23198 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cbx3P23198 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.44■□□□□ 0.54
Cbx3P23198 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.44■□□□□ 0.54
Cbx3P23198 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.44■□□□□ 0.54
Cbx3P23198 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.44■□□□□ 0.54
Cbx3P23198 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms