Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BdnfP21237 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.62■□□□□ 0.73
BdnfP21237 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BdnfP21237 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BdnfP21237 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BdnfP21237 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BdnfP21237 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.61■□□□□ 0.73
BdnfP21237 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BdnfP21237 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BdnfP21237 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BdnfP21237 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BdnfP21237 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BdnfP21237 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.6■□□□□ 0.73
BdnfP21237 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BdnfP21237 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BdnfP21237 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BdnfP21237 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BdnfP21237 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.59■□□□□ 0.73
BdnfP21237 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BdnfP21237 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BdnfP21237 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BdnfP21237 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BdnfP21237 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BdnfP21237 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BdnfP21237 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BdnfP21237 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BdnfP21237 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BdnfP21237 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BdnfP21237 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BdnfP21237 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BdnfP21237 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BdnfP21237 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BdnfP21237 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.57■□□□□ 0.72
BdnfP21237 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BdnfP21237 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BdnfP21237 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BdnfP21237 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.56■□□□□ 0.72
BdnfP21237 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
BdnfP21237 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BdnfP21237 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
BdnfP21237 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.55■□□□□ 0.72
BdnfP21237 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.55■□□□□ 0.72
BdnfP21237 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BdnfP21237 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BdnfP21237 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BdnfP21237 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BdnfP21237 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
BdnfP21237 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BdnfP21237 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BdnfP21237 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BdnfP21237 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.53■□□□□ 0.72
BdnfP21237 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BdnfP21237 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms