Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Fn1P11276 Mir6982-201ENSMUST00000184354 68 ntBASIC16.19■□□□□ 0.18
Fn1P11276 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fn1P11276 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Fn1P11276 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Fn1P11276 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fn1P11276 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fn1P11276 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fn1P11276 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Fn1P11276 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.18■□□□□ 0.18
Fn1P11276 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.17■□□□□ 0.18
Fn1P11276 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.17■□□□□ 0.18
Fn1P11276 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fn1P11276 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.17■□□□□ 0.18
Fn1P11276 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.16■□□□□ 0.18
Fn1P11276 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.16■□□□□ 0.18
Fn1P11276 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fn1P11276 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.16■□□□□ 0.18
Fn1P11276 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.16■□□□□ 0.18
Fn1P11276 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.16■□□□□ 0.18
Fn1P11276 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Fn1P11276 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.15■□□□□ 0.18
Fn1P11276 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fn1P11276 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fn1P11276 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fn1P11276 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fn1P11276 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fn1P11276 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Fn1P11276 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Fn1P11276 Gm13148-201ENSMUST00000118892 745 ntBASIC16.14■□□□□ 0.17
Fn1P11276 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fn1P11276 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fn1P11276 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.14■□□□□ 0.17
Fn1P11276 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fn1P11276 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.13■□□□□ 0.17
Fn1P11276 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.13■□□□□ 0.17
Fn1P11276 Gm43530-201ENSMUST00000195920 274 ntBASIC16.13■□□□□ 0.17
Fn1P11276 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Fn1P11276 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fn1P11276 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fn1P11276 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.13■□□□□ 0.17
Fn1P11276 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.13■□□□□ 0.17
Fn1P11276 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fn1P11276 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Fn1P11276 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Fn1P11276 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.12■□□□□ 0.17
Fn1P11276 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.12■□□□□ 0.17
Fn1P11276 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fn1P11276 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Fn1P11276 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.11■□□□□ 0.17
Fn1P11276 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fn1P11276 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fn1P11276 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fn1P11276 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fn1P11276 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fn1P11276 Mir5133-201ENSMUST00000174955 77 ntBASIC16.1■□□□□ 0.17
Fn1P11276 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fn1P11276 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Fn1P11276 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Fn1P11276 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fn1P11276 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Fn1P11276 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
Fn1P11276 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fn1P11276 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.09■□□□□ 0.17
Fn1P11276 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.09■□□□□ 0.17
Fn1P11276 Gm13836-201ENSMUST00000121159 501 ntBASIC16.09■□□□□ 0.17
Fn1P11276 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fn1P11276 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.09■□□□□ 0.17
Fn1P11276 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Fn1P11276 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fn1P11276 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fn1P11276 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fn1P11276 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.08■□□□□ 0.17
Fn1P11276 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Fn1P11276 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fn1P11276 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fn1P11276 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fn1P11276 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.08■□□□□ 0.16
Fn1P11276 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.08■□□□□ 0.16
Fn1P11276 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fn1P11276 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fn1P11276 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Fn1P11276 Gm13168-201ENSMUST00000121771 632 ntBASIC16.07■□□□□ 0.16
Fn1P11276 Gm11421-201ENSMUST00000122124 294 ntBASIC16.07■□□□□ 0.16
Fn1P11276 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Fn1P11276 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.07■□□□□ 0.16
Fn1P11276 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.07■□□□□ 0.16
Fn1P11276 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms