Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ApoeP08226 Iqck-206ENSMUST00000208658 2891 ntBASIC19.44■□□□□ 0.7
ApoeP08226 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ApoeP08226 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ApoeP08226 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ApoeP08226 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.43■□□□□ 0.7
ApoeP08226 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ApoeP08226 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ApoeP08226 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.42■□□□□ 0.7
ApoeP08226 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ApoeP08226 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ApoeP08226 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ApoeP08226 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ApoeP08226 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ApoeP08226 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Gm11687-201ENSMUST00000118911 886 ntBASIC19.41■□□□□ 0.7
ApoeP08226 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ApoeP08226 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
ApoeP08226 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ApoeP08226 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ApoeP08226 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ApoeP08226 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.4■□□□□ 0.7
ApoeP08226 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ApoeP08226 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ApoeP08226 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ApoeP08226 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
ApoeP08226 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ApoeP08226 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ApoeP08226 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ApoeP08226 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ApoeP08226 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ApoeP08226 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ApoeP08226 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ApoeP08226 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ApoeP08226 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ApoeP08226 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ApoeP08226 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ApoeP08226 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ApoeP08226 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ApoeP08226 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ApoeP08226 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.37■□□□□ 0.69
ApoeP08226 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ApoeP08226 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ApoeP08226 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.36■□□□□ 0.69
ApoeP08226 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.36■□□□□ 0.69
ApoeP08226 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ApoeP08226 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ApoeP08226 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ApoeP08226 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ApoeP08226 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.36■□□□□ 0.69
ApoeP08226 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.35■□□□□ 0.69
ApoeP08226 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.35■□□□□ 0.69
ApoeP08226 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ApoeP08226 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ApoeP08226 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ApoeP08226 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ApoeP08226 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ApoeP08226 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ApoeP08226 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ApoeP08226 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ApoeP08226 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ApoeP08226 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ApoeP08226 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.33■□□□□ 0.69
ApoeP08226 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
ApoeP08226 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ApoeP08226 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ApoeP08226 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.33■□□□□ 0.68
ApoeP08226 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms