Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.54■□□□□ 0.72
Col4a2P08122 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.54■□□□□ 0.72
Col4a2P08122 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.54■□□□□ 0.72
Col4a2P08122 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a2P08122 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a2P08122 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a2P08122 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Col4a2P08122 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.53■□□□□ 0.72
Col4a2P08122 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a2P08122 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col4a2P08122 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.52■□□□□ 0.72
Col4a2P08122 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a2P08122 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a2P08122 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a2P08122 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.51■□□□□ 0.71
Col4a2P08122 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a2P08122 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Col4a2P08122 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a2P08122 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.51■□□□□ 0.71
Col4a2P08122 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a2P08122 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a2P08122 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col4a2P08122 Gm8493-201ENSMUST00000196881 489 ntBASIC19.51■□□□□ 0.71
Col4a2P08122 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Col4a2P08122 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a2P08122 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col4a2P08122 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a2P08122 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Col4a2P08122 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a2P08122 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a2P08122 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a2P08122 Gm26571-201ENSMUST00000181399 666 ntBASIC19.49■□□□□ 0.71
Col4a2P08122 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
Col4a2P08122 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a2P08122 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col4a2P08122 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col4a2P08122 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.48■□□□□ 0.71
Col4a2P08122 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col4a2P08122 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.48■□□□□ 0.71
Col4a2P08122 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Col4a2P08122 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.48■□□□□ 0.71
Col4a2P08122 Gm7143-201ENSMUST00000222811 859 ntBASIC19.48■□□□□ 0.71
Col4a2P08122 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a2P08122 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.47■□□□□ 0.71
Col4a2P08122 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.47■□□□□ 0.71
Col4a2P08122 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a2P08122 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Col4a2P08122 Spcs1-204ENSMUST00000226782 949 ntBASIC19.46■□□□□ 0.71
Col4a2P08122 Gm5874-201ENSMUST00000096101 508 ntBASIC19.46■□□□□ 0.71
Col4a2P08122 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a2P08122 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Col4a2P08122 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a2P08122 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a2P08122 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.45■□□□□ 0.7
Col4a2P08122 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col4a2P08122 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a2P08122 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a2P08122 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a2P08122 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col4a2P08122 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.44■□□□□ 0.7
Col4a2P08122 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.44■□□□□ 0.7
Col4a2P08122 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.44■□□□□ 0.7
Col4a2P08122 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.44■□□□□ 0.7
Col4a2P08122 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.43■□□□□ 0.7
Col4a2P08122 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.43■□□□□ 0.7
Col4a2P08122 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col4a2P08122 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a2P08122 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Col4a2P08122 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a2P08122 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.42■□□□□ 0.7
Col4a2P08122 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col4a2P08122 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a2P08122 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a2P08122 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col4a2P08122 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a2P08122 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col4a2P08122 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col4a2P08122 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms