Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm12922-201ENSMUST00000120626 809 ntBASIC18.33■□□□□ 0.52
P06344 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P06344 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
P06344 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
P06344 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P06344 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.33■□□□□ 0.52
P06344 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P06344 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P06344 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
P06344 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P06344 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.32■□□□□ 0.52
P06344 Gm13241-201ENSMUST00000094493 780 ntBASIC18.32■□□□□ 0.52
P06344 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P06344 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P06344 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P06344 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.32■□□□□ 0.52
P06344 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.31■□□□□ 0.52
P06344 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.31■□□□□ 0.52
P06344 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.31■□□□□ 0.52
P06344 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
P06344 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06344 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P06344 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P06344 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P06344 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P06344 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.3■□□□□ 0.52
P06344 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P06344 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
P06344 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.29■□□□□ 0.52
P06344 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.29■□□□□ 0.52
P06344 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P06344 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.28■□□□□ 0.52
P06344 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P06344 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P06344 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
P06344 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P06344 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P06344 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
P06344 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.27■□□□□ 0.52
P06344 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.27■□□□□ 0.52
P06344 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P06344 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
P06344 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P06344 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P06344 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
P06344 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P06344 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P06344 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P06344 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P06344 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
P06344 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.26■□□□□ 0.51
P06344 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.26■□□□□ 0.51
P06344 Golgb1-201ENSMUST00000023534 498 ntBASIC18.26■□□□□ 0.51
P06344 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P06344 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P06344 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P06344 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Gm21956-201ENSMUST00000179946 522 ntBASIC18.25■□□□□ 0.51
P06344 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Gm9870-201ENSMUST00000063874 645 ntBASIC18.25■□□□□ 0.51
P06344 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P06344 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.25■□□□□ 0.51
P06344 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06344 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P06344 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06344 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06344 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06344 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06344 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06344 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06344 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
P06344 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P06344 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.23■□□□□ 0.51
P06344 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.23■□□□□ 0.51
P06344 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P06344 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
P06344 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P06344 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P06344 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
P06344 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P06344 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms