Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tgfb1P04202 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tgfb1P04202 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.04■□□□□ 0.64
Tgfb1P04202 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
Tgfb1P04202 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tgfb1P04202 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tgfb1P04202 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tgfb1P04202 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.03■□□□□ 0.64
Tgfb1P04202 Gm10232-201ENSMUST00000089221 720 ntBASIC19.03■□□□□ 0.64
Tgfb1P04202 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Tgfb1P04202 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.03■□□□□ 0.64
Tgfb1P04202 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tgfb1P04202 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tgfb1P04202 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tgfb1P04202 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tgfb1P04202 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tgfb1P04202 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.02■□□□□ 0.64
Tgfb1P04202 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Tgfb1P04202 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.02■□□□□ 0.64
Tgfb1P04202 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tgfb1P04202 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tgfb1P04202 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.02■□□□□ 0.64
Tgfb1P04202 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tgfb1P04202 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.02■□□□□ 0.63
Tgfb1P04202 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tgfb1P04202 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tgfb1P04202 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.01■□□□□ 0.63
Tgfb1P04202 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tgfb1P04202 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19■□□□□ 0.63
Tgfb1P04202 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19■□□□□ 0.63
Tgfb1P04202 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19■□□□□ 0.63
Tgfb1P04202 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tgfb1P04202 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tgfb1P04202 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tgfb1P04202 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tgfb1P04202 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Tgfb1P04202 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Tgfb1P04202 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tgfb1P04202 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.99■□□□□ 0.63
Tgfb1P04202 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tgfb1P04202 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tgfb1P04202 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Tgfb1P04202 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tgfb1P04202 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Tgfb1P04202 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Tgfb1P04202 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tgfb1P04202 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tgfb1P04202 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tgfb1P04202 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Tgfb1P04202 Gm10399-202ENSMUST00000202768 748 ntBASIC18.98■□□□□ 0.63
Tgfb1P04202 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tgfb1P04202 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tgfb1P04202 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tgfb1P04202 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tgfb1P04202 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tgfb1P04202 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.98■□□□□ 0.63
Tgfb1P04202 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tgfb1P04202 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tgfb1P04202 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tgfb1P04202 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tgfb1P04202 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tgfb1P04202 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tgfb1P04202 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.97■□□□□ 0.63
Tgfb1P04202 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tgfb1P04202 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tgfb1P04202 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tgfb1P04202 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tgfb1P04202 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tgfb1P04202 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.96■□□□□ 0.63
Tgfb1P04202 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tgfb1P04202 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfb1P04202 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms