Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxa3P02831 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxa3P02831 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hoxa3P02831 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.18■□□□□ 0.34
Hoxa3P02831 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxa3P02831 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxa3P02831 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxa3P02831 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxa3P02831 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxa3P02831 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxa3P02831 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Hoxa3P02831 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxa3P02831 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.17■□□□□ 0.34
Hoxa3P02831 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxa3P02831 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxa3P02831 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Hoxa3P02831 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxa3P02831 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hoxa3P02831 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxa3P02831 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.16■□□□□ 0.34
Hoxa3P02831 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hoxa3P02831 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxa3P02831 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hoxa3P02831 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.16■□□□□ 0.34
Hoxa3P02831 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxa3P02831 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Hoxa3P02831 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxa3P02831 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hoxa3P02831 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxa3P02831 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxa3P02831 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa3P02831 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa3P02831 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa3P02831 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa3P02831 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.15■□□□□ 0.34
Hoxa3P02831 Golgb1-201ENSMUST00000023534 498 ntBASIC17.15■□□□□ 0.34
Hoxa3P02831 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hoxa3P02831 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa3P02831 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa3P02831 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Hoxa3P02831 Notumos-201ENSMUST00000151998 2659 ntBASIC17.14■□□□□ 0.34
Hoxa3P02831 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
Hoxa3P02831 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.14■□□□□ 0.33
Hoxa3P02831 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.14■□□□□ 0.33
Hoxa3P02831 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
Hoxa3P02831 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa3P02831 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.14■□□□□ 0.33
Hoxa3P02831 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa3P02831 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hoxa3P02831 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa3P02831 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa3P02831 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hoxa3P02831 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hoxa3P02831 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.13■□□□□ 0.33
Hoxa3P02831 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hoxa3P02831 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hoxa3P02831 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hoxa3P02831 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa3P02831 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.11■□□□□ 0.33
Hoxa3P02831 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa3P02831 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.11■□□□□ 0.33
Hoxa3P02831 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.11■□□□□ 0.33
Hoxa3P02831 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.11■□□□□ 0.33
Hoxa3P02831 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.11■□□□□ 0.33
Hoxa3P02831 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.11■□□□□ 0.33
Hoxa3P02831 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa3P02831 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa3P02831 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa3P02831 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa3P02831 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa3P02831 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa3P02831 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa3P02831 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Hoxa3P02831 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hoxa3P02831 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.1■□□□□ 0.33
Hoxa3P02831 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa3P02831 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa3P02831 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxa3P02831 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.1■□□□□ 0.33
Hoxa3P02831 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa3P02831 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxa3P02831 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.09■□□□□ 0.33
Hoxa3P02831 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa3P02831 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms