Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cops4O88544 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cops4O88544 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cops4O88544 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cops4O88544 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops4O88544 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.86■□□□□ 0.61
Cops4O88544 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops4O88544 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops4O88544 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cops4O88544 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.86■□□□□ 0.61
Cops4O88544 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.86■□□□□ 0.61
Cops4O88544 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops4O88544 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops4O88544 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cops4O88544 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Gm27502-201ENSMUST00000183495 199 ntBASIC18.85■□□□□ 0.61
Cops4O88544 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops4O88544 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops4O88544 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cops4O88544 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cops4O88544 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cops4O88544 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops4O88544 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cops4O88544 Gm11175-201ENSMUST00000116172 543 ntBASIC18.83■□□□□ 0.6
Cops4O88544 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
Cops4O88544 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.83■□□□□ 0.6
Cops4O88544 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cops4O88544 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cops4O88544 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cops4O88544 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.82■□□□□ 0.6
Cops4O88544 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cops4O88544 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cops4O88544 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.82■□□□□ 0.6
Cops4O88544 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cops4O88544 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cops4O88544 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cops4O88544 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.81■□□□□ 0.6
Cops4O88544 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops4O88544 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.8■□□□□ 0.6
Cops4O88544 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cops4O88544 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cops4O88544 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cops4O88544 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.8■□□□□ 0.6
Cops4O88544 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops4O88544 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cops4O88544 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms