Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3bO88509 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnmt3bO88509 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Dnmt3bO88509 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnmt3bO88509 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.74■□□□□ 0.75
Dnmt3bO88509 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.74■□□□□ 0.75
Dnmt3bO88509 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.73■□□□□ 0.75
Dnmt3bO88509 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnmt3bO88509 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnmt3bO88509 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnmt3bO88509 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnmt3bO88509 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnmt3bO88509 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnmt3bO88509 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.7■□□□□ 0.74
Dnmt3bO88509 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.7■□□□□ 0.74
Dnmt3bO88509 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.7■□□□□ 0.74
Dnmt3bO88509 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnmt3bO88509 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.69■□□□□ 0.74
Dnmt3bO88509 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.69■□□□□ 0.74
Dnmt3bO88509 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Dnmt3bO88509 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dnmt3bO88509 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnmt3bO88509 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnmt3bO88509 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnmt3bO88509 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnmt3bO88509 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnmt3bO88509 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnmt3bO88509 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms