Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.43■□□□□ 0.86
Cacna1hO88427 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1hO88427 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.43■□□□□ 0.86
Cacna1hO88427 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1hO88427 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1hO88427 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1hO88427 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1hO88427 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1hO88427 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cacna1hO88427 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.42■□□□□ 0.86
Cacna1hO88427 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1hO88427 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1hO88427 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1hO88427 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1hO88427 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.42■□□□□ 0.86
Cacna1hO88427 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1hO88427 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.42■□□□□ 0.86
Cacna1hO88427 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1hO88427 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1hO88427 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1hO88427 Mir6982-201ENSMUST00000184354 68 ntBASIC20.41■□□□□ 0.86
Cacna1hO88427 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1hO88427 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1hO88427 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1hO88427 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Cacna1hO88427 Gm43530-201ENSMUST00000195920 274 ntBASIC20.4■□□□□ 0.86
Cacna1hO88427 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1hO88427 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cacna1hO88427 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.39■□□□□ 0.86
Cacna1hO88427 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.39■□□□□ 0.86
Cacna1hO88427 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1hO88427 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.39■□□□□ 0.85
Cacna1hO88427 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1hO88427 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cacna1hO88427 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cacna1hO88427 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1hO88427 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1hO88427 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1hO88427 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1hO88427 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Cacna1hO88427 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.37■□□□□ 0.85
Cacna1hO88427 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cacna1hO88427 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1hO88427 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.37■□□□□ 0.85
Cacna1hO88427 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cacna1hO88427 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.36■□□□□ 0.85
Cacna1hO88427 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1hO88427 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.36■□□□□ 0.85
Cacna1hO88427 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
Cacna1hO88427 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1hO88427 Gm13148-201ENSMUST00000118892 745 ntBASIC20.35■□□□□ 0.85
Cacna1hO88427 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1hO88427 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1hO88427 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cacna1hO88427 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1hO88427 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.35■□□□□ 0.85
Cacna1hO88427 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
Cacna1hO88427 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.34■□□□□ 0.85
Cacna1hO88427 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.34■□□□□ 0.85
Cacna1hO88427 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1hO88427 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Cacna1hO88427 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cacna1hO88427 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1hO88427 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacna1hO88427 Mir5133-201ENSMUST00000174955 77 ntBASIC20.32■□□□□ 0.84
Cacna1hO88427 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.32■□□□□ 0.84
Cacna1hO88427 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1hO88427 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1hO88427 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1hO88427 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.32■□□□□ 0.84
Cacna1hO88427 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cacna1hO88427 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.31■□□□□ 0.84
Cacna1hO88427 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cacna1hO88427 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1hO88427 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1hO88427 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.3■□□□□ 0.84
Cacna1hO88427 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1hO88427 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1hO88427 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.3■□□□□ 0.84
Cacna1hO88427 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cacna1hO88427 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1hO88427 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.29■□□□□ 0.84
Cacna1hO88427 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.29■□□□□ 0.84
Cacna1hO88427 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1hO88427 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1hO88427 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1hO88427 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cacna1hO88427 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.28■□□□□ 0.84
Cacna1hO88427 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1hO88427 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cacna1hO88427 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cacna1hO88427 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms