Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Kcnu1O54982 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Kcnu1O54982 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.96■■□□□ 1.11
Kcnu1O54982 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Kcnu1O54982 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Kcnu1O54982 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Kcnu1O54982 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.94■■□□□ 1.1
Kcnu1O54982 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.94■■□□□ 1.1
Kcnu1O54982 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Kcnu1O54982 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.93■■□□□ 1.1
Kcnu1O54982 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.93■■□□□ 1.1
Kcnu1O54982 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kcnu1O54982 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
Kcnu1O54982 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kcnu1O54982 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Kcnu1O54982 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Kcnu1O54982 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Kcnu1O54982 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Kcnu1O54982 Gm10232-201ENSMUST00000089221 720 ntBASIC21.91■■□□□ 1.1
Kcnu1O54982 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.91■■□□□ 1.1
Kcnu1O54982 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Kcnu1O54982 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Kcnu1O54982 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kcnu1O54982 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kcnu1O54982 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Kcnu1O54982 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.9■■□□□ 1.1
Kcnu1O54982 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.9■■□□□ 1.1
Kcnu1O54982 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Kcnu1O54982 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kcnu1O54982 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Kcnu1O54982 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kcnu1O54982 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kcnu1O54982 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Kcnu1O54982 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Kcnu1O54982 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Kcnu1O54982 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.89■■□□□ 1.1
Kcnu1O54982 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kcnu1O54982 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Kcnu1O54982 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kcnu1O54982 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kcnu1O54982 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Kcnu1O54982 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.88■■□□□ 1.09
Kcnu1O54982 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.88■■□□□ 1.09
Kcnu1O54982 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.88■■□□□ 1.09
Kcnu1O54982 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Kcnu1O54982 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Kcnu1O54982 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Kcnu1O54982 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Kcnu1O54982 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kcnu1O54982 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kcnu1O54982 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Kcnu1O54982 Gm10399-202ENSMUST00000202768 748 ntBASIC21.87■■□□□ 1.09
Kcnu1O54982 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kcnu1O54982 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Kcnu1O54982 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Kcnu1O54982 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kcnu1O54982 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kcnu1O54982 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms