Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk2O54785 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk2O54785 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.91■□□□□ 0.94
Limk2O54785 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk2O54785 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Limk2O54785 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk2O54785 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Limk2O54785 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Limk2O54785 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Limk2O54785 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.9■□□□□ 0.94
Limk2O54785 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Limk2O54785 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.9■□□□□ 0.94
Limk2O54785 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.9■□□□□ 0.94
Limk2O54785 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Limk2O54785 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Limk2O54785 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Limk2O54785 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Limk2O54785 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Limk2O54785 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
Limk2O54785 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Limk2O54785 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Limk2O54785 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.89■□□□□ 0.93
Limk2O54785 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.89■□□□□ 0.93
Limk2O54785 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Limk2O54785 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Limk2O54785 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.88■□□□□ 0.93
Limk2O54785 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Limk2O54785 Serp2-204ENSMUST00000228055 705 ntBASIC20.87■□□□□ 0.93
Limk2O54785 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.87■□□□□ 0.93
Limk2O54785 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk2O54785 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Limk2O54785 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Limk2O54785 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Limk2O54785 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.86■□□□□ 0.93
Limk2O54785 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Limk2O54785 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Limk2O54785 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Limk2O54785 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Limk2O54785 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Limk2O54785 Gm12821-201ENSMUST00000120022 600 ntBASIC20.84■□□□□ 0.93
Limk2O54785 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Limk2O54785 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Limk2O54785 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Limk2O54785 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Limk2O54785 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Limk2O54785 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.83■□□□□ 0.93
Limk2O54785 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.83■□□□□ 0.93
Limk2O54785 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Limk2O54785 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Limk2O54785 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.82■□□□□ 0.92
Limk2O54785 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Limk2O54785 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk2O54785 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk2O54785 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk2O54785 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk2O54785 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Limk2O54785 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Limk2O54785 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.81■□□□□ 0.92
Limk2O54785 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk2O54785 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Limk2O54785 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.81■□□□□ 0.92
Limk2O54785 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Limk2O54785 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk2O54785 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Limk2O54785 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
Limk2O54785 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Limk2O54785 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Limk2O54785 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk2O54785 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Limk2O54785 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk2O54785 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Limk2O54785 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.79■□□□□ 0.92
Limk2O54785 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Limk2O54785 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Limk2O54785 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Limk2O54785 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Limk2O54785 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Limk2O54785 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Limk2O54785 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk2O54785 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk2O54785 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
Limk2O54785 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms