Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Capn1O35350 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Capn1O35350 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Capn1O35350 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.91■□□□□ 0.62
Capn1O35350 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capn1O35350 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Capn1O35350 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capn1O35350 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capn1O35350 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Capn1O35350 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Capn1O35350 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capn1O35350 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Capn1O35350 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.9■□□□□ 0.62
Capn1O35350 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.9■□□□□ 0.62
Capn1O35350 Golgb1-201ENSMUST00000023534 498 ntBASIC18.9■□□□□ 0.62
Capn1O35350 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capn1O35350 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Capn1O35350 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Capn1O35350 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Capn1O35350 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.89■□□□□ 0.61
Capn1O35350 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capn1O35350 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capn1O35350 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Capn1O35350 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capn1O35350 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Capn1O35350 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capn1O35350 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capn1O35350 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capn1O35350 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Capn1O35350 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.88■□□□□ 0.61
Capn1O35350 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capn1O35350 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capn1O35350 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Capn1O35350 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.88■□□□□ 0.61
Capn1O35350 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capn1O35350 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capn1O35350 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.87■□□□□ 0.61
Capn1O35350 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capn1O35350 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capn1O35350 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.86■□□□□ 0.61
Capn1O35350 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Capn1O35350 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.85■□□□□ 0.61
Capn1O35350 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.85■□□□□ 0.61
Capn1O35350 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Capn1O35350 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Capn1O35350 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capn1O35350 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capn1O35350 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capn1O35350 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Capn1O35350 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.84■□□□□ 0.61
Capn1O35350 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Capn1O35350 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capn1O35350 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Capn1O35350 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.84■□□□□ 0.61
Capn1O35350 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Capn1O35350 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Capn1O35350 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Capn1O35350 Gm12821-201ENSMUST00000120022 600 ntBASIC18.83■□□□□ 0.6
Capn1O35350 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.83■□□□□ 0.6
Capn1O35350 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.83■□□□□ 0.6
Capn1O35350 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capn1O35350 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capn1O35350 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capn1O35350 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capn1O35350 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capn1O35350 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.83■□□□□ 0.6
Capn1O35350 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Capn1O35350 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Capn1O35350 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capn1O35350 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Capn1O35350 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capn1O35350 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Capn1O35350 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Capn1O35350 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Capn1O35350 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.82■□□□□ 0.6
Capn1O35350 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capn1O35350 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capn1O35350 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Capn1O35350 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capn1O35350 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capn1O35350 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.81■□□□□ 0.6
Capn1O35350 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms