Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ndufb11O09111 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ndufb11O09111 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Ndufb11O09111 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufb11O09111 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ndufb11O09111 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufb11O09111 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ndufb11O09111 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.47■□□□□ 0.23
Ndufb11O09111 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ndufb11O09111 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Ndufb11O09111 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.47■□□□□ 0.23
Ndufb11O09111 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufb11O09111 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ndufb11O09111 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.46■□□□□ 0.23
Ndufb11O09111 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufb11O09111 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufb11O09111 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ndufb11O09111 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufb11O09111 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufb11O09111 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufb11O09111 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ndufb11O09111 Golph3-205ENSMUST00000228671 2842 ntBASIC16.45■□□□□ 0.22
Ndufb11O09111 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ndufb11O09111 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufb11O09111 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufb11O09111 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufb11O09111 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufb11O09111 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.44■□□□□ 0.22
Ndufb11O09111 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ndufb11O09111 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.44■□□□□ 0.22
Ndufb11O09111 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufb11O09111 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
Ndufb11O09111 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ndufb11O09111 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.43■□□□□ 0.22
Ndufb11O09111 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.43■□□□□ 0.22
Ndufb11O09111 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufb11O09111 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.43■□□□□ 0.22
Ndufb11O09111 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.42■□□□□ 0.22
Ndufb11O09111 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ndufb11O09111 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufb11O09111 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.41■□□□□ 0.22
Ndufb11O09111 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ndufb11O09111 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.41■□□□□ 0.22
Ndufb11O09111 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ndufb11O09111 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndufb11O09111 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 244.4 ms