Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr2jO08740 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Polr2jO08740 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Polr2jO08740 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.69■□□□□ 0.74
Polr2jO08740 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.69■□□□□ 0.74
Polr2jO08740 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Polr2jO08740 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.69■□□□□ 0.74
Polr2jO08740 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2jO08740 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Polr2jO08740 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2jO08740 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2jO08740 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.68■□□□□ 0.74
Polr2jO08740 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2jO08740 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2jO08740 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.68■□□□□ 0.74
Polr2jO08740 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2jO08740 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
Polr2jO08740 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2jO08740 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Polr2jO08740 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.66■□□□□ 0.74
Polr2jO08740 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.66■□□□□ 0.74
Polr2jO08740 Gm10420-201ENSMUST00000121713 882 ntBASIC19.66■□□□□ 0.74
Polr2jO08740 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Polr2jO08740 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.66■□□□□ 0.74
Polr2jO08740 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.66■□□□□ 0.74
Polr2jO08740 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2jO08740 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.65■□□□□ 0.74
Polr2jO08740 Gm12366-201ENSMUST00000121722 873 ntBASIC19.65■□□□□ 0.74
Polr2jO08740 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr2jO08740 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.65■□□□□ 0.74
Polr2jO08740 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.65■□□□□ 0.74
Polr2jO08740 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Gm5786-201ENSMUST00000085368 882 ntBASIC19.65■□□□□ 0.74
Polr2jO08740 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2jO08740 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.64■□□□□ 0.74
Polr2jO08740 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2jO08740 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Polr2jO08740 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2jO08740 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Polr2jO08740 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2jO08740 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.64■□□□□ 0.73
Polr2jO08740 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.64■□□□□ 0.73
Polr2jO08740 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2jO08740 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Polr2jO08740 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.63■□□□□ 0.73
Polr2jO08740 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2jO08740 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Polr2jO08740 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2jO08740 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.62■□□□□ 0.73
Polr2jO08740 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Polr2jO08740 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2jO08740 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2jO08740 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Polr2jO08740 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.62■□□□□ 0.73
Polr2jO08740 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2jO08740 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.62■□□□□ 0.73
Polr2jO08740 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Polr2jO08740 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2jO08740 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2jO08740 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2jO08740 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2jO08740 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms