Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf11bO08712 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf11bO08712 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf11bO08712 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf11bO08712 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfrsf11bO08712 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfrsf11bO08712 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Gm5921-201ENSMUST00000075898 882 ntBASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tnfrsf11bO08712 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Gm43566-201ENSMUST00000196851 808 ntBASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tnfrsf11bO08712 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf11bO08712 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11bO08712 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tnfrsf11bO08712 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11bO08712 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tnfrsf11bO08712 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf11bO08712 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf11bO08712 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf11bO08712 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tnfrsf11bO08712 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.83■□□□□ 0.93
Tnfrsf11bO08712 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
Tnfrsf11bO08712 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tnfrsf11bO08712 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf11bO08712 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf11bO08712 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11bO08712 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11bO08712 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf11bO08712 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11bO08712 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf11bO08712 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf11bO08712 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11bO08712 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf11bO08712 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11bO08712 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms