Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
B020004C17RikJ3QP07 Gm10849-201ENSMUST00000100397 618 ntBASIC23.36■■□□□ 1.33
B020004C17RikJ3QP07 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
B020004C17RikJ3QP07 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
B020004C17RikJ3QP07 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Gm26571-201ENSMUST00000181399 666 ntBASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
B020004C17RikJ3QP07 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.34■■□□□ 1.33
B020004C17RikJ3QP07 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.34■■□□□ 1.33
B020004C17RikJ3QP07 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
B020004C17RikJ3QP07 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
B020004C17RikJ3QP07 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
B020004C17RikJ3QP07 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
B020004C17RikJ3QP07 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
B020004C17RikJ3QP07 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.33■■□□□ 1.33
B020004C17RikJ3QP07 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.33■■□□□ 1.33
B020004C17RikJ3QP07 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.33■■□□□ 1.32
B020004C17RikJ3QP07 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Smad6-203ENSMUST00000179458 273 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Gm42569-201ENSMUST00000200539 472 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Gm42642-201ENSMUST00000200683 355 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
B020004C17RikJ3QP07 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
B020004C17RikJ3QP07 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.31■■□□□ 1.32
B020004C17RikJ3QP07 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
B020004C17RikJ3QP07 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
B020004C17RikJ3QP07 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
B020004C17RikJ3QP07 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
B020004C17RikJ3QP07 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.3■■□□□ 1.32
B020004C17RikJ3QP07 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.3■■□□□ 1.32
B020004C17RikJ3QP07 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
B020004C17RikJ3QP07 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.3■■□□□ 1.32
B020004C17RikJ3QP07 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
B020004C17RikJ3QP07 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
B020004C17RikJ3QP07 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
B020004C17RikJ3QP07 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
B020004C17RikJ3QP07 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
B020004C17RikJ3QP07 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Gm40848-201ENSMUST00000221998 324 ntBASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
B020004C17RikJ3QP07 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
B020004C17RikJ3QP07 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
B020004C17RikJ3QP07 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
B020004C17RikJ3QP07 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.26■■□□□ 1.31
B020004C17RikJ3QP07 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
B020004C17RikJ3QP07 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
B020004C17RikJ3QP07 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
B020004C17RikJ3QP07 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.25■■□□□ 1.31
B020004C17RikJ3QP07 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
B020004C17RikJ3QP07 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
B020004C17RikJ3QP07 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.24■■□□□ 1.31
B020004C17RikJ3QP07 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
B020004C17RikJ3QP07 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
B020004C17RikJ3QP07 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.23■■□□□ 1.31
B020004C17RikJ3QP07 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
B020004C17RikJ3QP07 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
B020004C17RikJ3QP07 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms