Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm3139J3QK78 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.53■□□□□ 0.88
Gm3139J3QK78 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm3139J3QK78 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.52■□□□□ 0.88
Gm3139J3QK78 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.52■□□□□ 0.88
Gm3139J3QK78 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Gm3139J3QK78 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.51■□□□□ 0.87
Gm3139J3QK78 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.51■□□□□ 0.87
Gm3139J3QK78 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3139J3QK78 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3139J3QK78 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.5■□□□□ 0.87
Gm3139J3QK78 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3139J3QK78 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm3139J3QK78 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.5■□□□□ 0.87
Gm3139J3QK78 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3139J3QK78 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3139J3QK78 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3139J3QK78 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3139J3QK78 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3139J3QK78 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3139J3QK78 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3139J3QK78 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3139J3QK78 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3139J3QK78 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3139J3QK78 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.48■□□□□ 0.87
Gm3139J3QK78 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3139J3QK78 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3139J3QK78 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Gm3139J3QK78 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3139J3QK78 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.47■□□□□ 0.87
Gm3139J3QK78 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3139J3QK78 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3139J3QK78 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm3139J3QK78 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.46■□□□□ 0.87
Gm3139J3QK78 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3139J3QK78 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gm3139J3QK78 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.44■□□□□ 0.86
Gm3139J3QK78 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3139J3QK78 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3139J3QK78 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3139J3QK78 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Gm3139J3QK78 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gm3139J3QK78 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3139J3QK78 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms