Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn20G5E8X0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldn20G5E8X0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Gm10420-201ENSMUST00000121713 882 ntBASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn20G5E8X0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cldn20G5E8X0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn20G5E8X0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cldn20G5E8X0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn20G5E8X0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn20G5E8X0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn20G5E8X0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Cldn20G5E8X0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.76■□□□□ 0.43
Cldn20G5E8X0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn20G5E8X0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn20G5E8X0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn20G5E8X0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn20G5E8X0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn20G5E8X0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms