Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.93■□□□□ 0.94
Trim55G3X8Y1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim55G3X8Y1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim55G3X8Y1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim55G3X8Y1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim55G3X8Y1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim55G3X8Y1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim55G3X8Y1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim55G3X8Y1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.89■□□□□ 0.94
Trim55G3X8Y1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim55G3X8Y1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim55G3X8Y1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim55G3X8Y1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim55G3X8Y1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim55G3X8Y1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim55G3X8Y1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim55G3X8Y1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim55G3X8Y1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.83■□□□□ 0.93
Trim55G3X8Y1 Nkain2-201ENSMUST00000092602 558 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms