Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh1F7BJK1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh1F7BJK1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.48■□□□□ 0.55
Pcdh1F7BJK1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Gm14523-201ENSMUST00000117260 558 ntBASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh1F7BJK1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh1F7BJK1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh1F7BJK1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 Gm27502-201ENSMUST00000183495 199 ntBASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh1F7BJK1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh1F7BJK1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh1F7BJK1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Gm7332-201ENSMUST00000118351 454 ntBASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh1F7BJK1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms