Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Gm9806-201ENSMUST00000051080 552 ntBASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc28a1E9PXX9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Scarna2-201ENSMUST00000157560 414 ntBASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Gm16437-201ENSMUST00000025669 507 ntBASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.35■□□□□ 0.69
Slc28a1E9PXX9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Slc28a1E9PXX9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc28a1E9PXX9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Slc28a1E9PXX9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Slc28a1E9PXX9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc28a1E9PXX9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc28a1E9PXX9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc28a1E9PXX9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.32■□□□□ 0.68
Slc28a1E9PXX9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Slc28a1E9PXX9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc28a1E9PXX9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc28a1E9PXX9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc28a1E9PXX9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc28a1E9PXX9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc28a1E9PXX9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc28a1E9PXX9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc28a1E9PXX9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc28a1E9PXX9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc28a1E9PXX9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Gm11687-201ENSMUST00000118911 886 ntBASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc28a1E9PXX9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Slc28a1E9PXX9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc28a1E9PXX9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc28a1E9PXX9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc28a1E9PXX9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.27■□□□□ 0.68
Slc28a1E9PXX9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.27■□□□□ 0.68
Slc28a1E9PXX9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc28a1E9PXX9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Slc28a1E9PXX9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms