Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Gm715-201ENSMUST00000117865 831 ntBASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmcn1D3YXG0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmcn1D3YXG0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Gm11643-201ENSMUST00000119578 864 ntBASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Gm5408-201ENSMUST00000197998 747 ntBASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hmcn1D3YXG0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Gm13234-201ENSMUST00000120010 747 ntBASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Gm43859-201ENSMUST00000200075 1412 ntBASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Gm10459-201ENSMUST00000202708 1155 ntBASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Reep4-203ENSMUST00000226563 1444 ntBASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmcn1D3YXG0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms