Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Shroom2A2ALU4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC33.5■■■□□ 2.95
Shroom2A2ALU4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Shroom2A2ALU4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Shroom2A2ALU4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC33.49■■■□□ 2.95
Shroom2A2ALU4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
Shroom2A2ALU4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95
Shroom2A2ALU4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Shroom2A2ALU4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Shroom2A2ALU4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC33.48■■■□□ 2.95
Shroom2A2ALU4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95
Shroom2A2ALU4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Shroom2A2ALU4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Gm42699-201ENSMUST00000198104 1657 ntBASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Mir6982-201ENSMUST00000184354 68 ntBASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Shroom2A2ALU4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Shroom2A2ALU4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Shroom2A2ALU4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC33.45■■■□□ 2.95
Shroom2A2ALU4 Gm13168-201ENSMUST00000121771 632 ntBASIC33.44■■■□□ 2.94
Shroom2A2ALU4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
Shroom2A2ALU4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Shroom2A2ALU4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Shroom2A2ALU4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Shroom2A2ALU4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC33.44■■■□□ 2.94
Shroom2A2ALU4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
Shroom2A2ALU4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Shroom2A2ALU4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Shroom2A2ALU4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Shroom2A2ALU4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC33.43■■■□□ 2.94
Shroom2A2ALU4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC33.43■■■□□ 2.94
Shroom2A2ALU4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Mir5133-201ENSMUST00000174955 77 ntBASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Shroom2A2ALU4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Shroom2A2ALU4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Shroom2A2ALU4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC33.41■■■□□ 2.94
Shroom2A2ALU4 Gm29994-201ENSMUST00000195495 1193 ntBASIC33.4■■■□□ 2.94
Shroom2A2ALU4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Shroom2A2ALU4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC33.39■■■□□ 2.94
Shroom2A2ALU4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Shroom2A2ALU4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC33.38■■■□□ 2.93
Shroom2A2ALU4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC33.38■■■□□ 2.93
Shroom2A2ALU4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
Shroom2A2ALU4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Shroom2A2ALU4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
Shroom2A2ALU4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Shroom2A2ALU4 Gm10812-201ENSMUST00000099864 546 ntBASIC33.37■■■□□ 2.93
Shroom2A2ALU4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Shroom2A2ALU4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC33.35■■■□□ 2.93
Shroom2A2ALU4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC33.35■■■□□ 2.93
Shroom2A2ALU4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Shroom2A2ALU4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Shroom2A2ALU4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Shroom2A2ALU4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC33.34■■■□□ 2.93
Shroom2A2ALU4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC33.34■■■□□ 2.93
Shroom2A2ALU4 Gm42555-201ENSMUST00000199304 1039 ntBASIC33.34■■■□□ 2.93
Shroom2A2ALU4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Shroom2A2ALU4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC33.33■■■□□ 2.93
Shroom2A2ALU4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC33.33■■■□□ 2.93
Shroom2A2ALU4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Shroom2A2ALU4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Shroom2A2ALU4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Shroom2A2ALU4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC33.32■■■□□ 2.92
Shroom2A2ALU4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC33.32■■■□□ 2.92
Shroom2A2ALU4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Shroom2A2ALU4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Shroom2A2ALU4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Shroom2A2ALU4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Shroom2A2ALU4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC33.31■■■□□ 2.92
Shroom2A2ALU4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Shroom2A2ALU4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Shroom2A2ALU4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Shroom2A2ALU4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Shroom2A2ALU4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
Shroom2A2ALU4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
Shroom2A2ALU4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Shroom2A2ALU4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
Shroom2A2ALU4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Shroom2A2ALU4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
Shroom2A2ALU4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC33.28■■■□□ 2.92
Shroom2A2ALU4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
Shroom2A2ALU4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
Shroom2A2ALU4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Shroom2A2ALU4 Gm13234-201ENSMUST00000120010 747 ntBASIC33.27■■■□□ 2.92
Shroom2A2ALU4 Gm13181-201ENSMUST00000120117 1069 ntBASIC33.27■■■□□ 2.92
Shroom2A2ALU4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms