Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-1A0N8R0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav12d-1A0N8R0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12d-1A0N8R0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav12d-1A0N8R0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav12d-1A0N8R0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12d-1A0N8R0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.52■□□□□ 0.23
Trav12d-1A0N8R0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trav12d-1A0N8R0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Gm27502-201ENSMUST00000183495 199 ntBASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-1A0N8R0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Gm7332-201ENSMUST00000118351 454 ntBASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-1A0N8R0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-1A0N8R0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-1A0N8R0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms