Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc194A0A140LIT1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
Ccdc194A0A140LIT1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc194A0A140LIT1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc194A0A140LIT1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.39■□□□□ 0.85
Ccdc194A0A140LIT1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc194A0A140LIT1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc194A0A140LIT1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc194A0A140LIT1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc194A0A140LIT1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc194A0A140LIT1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc194A0A140LIT1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc194A0A140LIT1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc194A0A140LIT1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Ccdc194A0A140LIT1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc194A0A140LIT1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc194A0A140LIT1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.33■□□□□ 0.85
Ccdc194A0A140LIT1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.33■□□□□ 0.85
Ccdc194A0A140LIT1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc194A0A140LIT1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccdc194A0A140LIT1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc194A0A140LIT1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc194A0A140LIT1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms