Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav23A0A0G2JG17 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav23A0A0G2JG17 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav23A0A0G2JG17 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav23A0A0G2JG17 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav23A0A0G2JG17 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav23A0A0G2JG17 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav23A0A0G2JG17 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav23A0A0G2JG17 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav23A0A0G2JG17 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav23A0A0G2JG17 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav23A0A0G2JG17 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav23A0A0G2JG17 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav23A0A0G2JG17 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav23A0A0G2JG17 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms