Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv8-27A0A0G2JF28 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv8-27A0A0G2JF28 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv8-27A0A0G2JF28 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Gm5987-201ENSMUST00000196433 1151 ntBASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.85□□□□□ -0.35
Igkv8-27A0A0G2JF28 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-27A0A0G2JF28 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-27A0A0G2JF28 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-27A0A0G2JF28 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-27A0A0G2JF28 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms